Created
January 29, 2026 10:45
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(partial) EasyBuild log for failed build of /tmp/eb-uewjgtfq/files_pr25178/x/XZ/XZ-5.8.1-GCCcore-14.3.0.eb (PR(s) #25178)
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| == 2026-01-29 11:45:06,493 easyblock.py:372 INFO This is EasyBuild 5.2.1.dev0 (framework: 5.2.1.dev0, easyblocks: 5.2.1.dev0) on host jrc0901.jureca. | |
| == 2026-01-29 11:45:06,493 easyblock.py:378 INFO This is easyblock ConfigureMake from module easybuild.easyblocks.generic.configuremake (/p/project1/cswmanage/reuter1/EasyBuild/prog/lib/python3.9/site-packages/easybuild/easyblocks/generic/configuremake.py) | |
| == 2026-01-29 11:45:06,493 easyblock.py:1177 INFO Build dir set to /dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0 | |
| == 2026-01-29 11:45:06,493 easyblock.py:1240 INFO Software install dir set to /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/XZ/5.8.1-GCCcore-14.3.0 | |
| == 2026-01-29 11:45:06,493 easyblock.py:1245 INFO Module install dir set to /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all | |
| == 2026-01-29 11:45:06,493 easyblock.py:346 INFO Init completed for application name XZ version 5.8.1 | |
| == 2026-01-29 11:45:06,493 easyblock.py:5067 INFO Obtained application instance for XZ (easyblock: ConfigureMake) | |
| == 2026-01-29 11:45:06,493 easyconfig.py:1814 INFO Generating template values... | |
| == 2026-01-29 11:45:06,493 easyconfig.py:1833 INFO Template values: arch='aarch64', bitbucket_account='xz', cuda_cc_cmake='90', cuda_cc_nvhpc='cc90', cuda_cc_semicolon_sep='9.0', cuda_cc_space_sep='9.0', cuda_cc_space_sep_no_period='90', cuda_compute_capabilities='9.0', cuda_int_comma_sep='90', cuda_int_semicolon_sep='90', cuda_int_space_sep='90', cuda_sm_comma_sep='sm_90', cuda_sm_space_sep='sm_90', github_account='xz', module_name='XZ/5.8.1', name='XZ', nameletter='X', nameletterlower='x', namelower='xz', rpath_enabled='true', software_commit='', sysroot='', toolchain_name='GCCcore', toolchain_version='14.3.0', version='5.8.1', version_major='5', version_major_minor='5.8', version_major_minor_patch='5.8.1', version_minor='8', version_minor_patch='8.1', version_patch='1', versionprefix='', versionsuffix='' | |
| == 2026-01-29 11:45:06,494 one.py:179 INFO Skipping reformatting value for parameter 'toolchain' | |
| == 2026-01-29 11:45:06,494 filetools.py:2061 INFO Creating directory /tmp/eb-uewjgtfq/reprod_20260129114506_1435855 (parents: True, set_gid: False, sticky: False) | |
| == 2026-01-29 11:45:06,494 easyblock.py:5348 INFO Dumped easyconfig instance to /tmp/eb-uewjgtfq/reprod_20260129114506_1435855/XZ-5.8.1-GCCcore-14.3.0.eb | |
| == 2026-01-29 11:45:06,495 filetools.py:2061 INFO Creating directory /tmp/eb-uewjgtfq/reprod_20260129114506_1435855/easyblocks (parents: True, set_gid: False, sticky: False) | |
| == 2026-01-29 11:45:06,495 filetools.py:2545 INFO /p/project1/cswmanage/reuter1/EasyBuild/prog/lib/python3.9/site-packages/easybuild/easyblocks/generic/configuremake.py copied to /tmp/eb-uewjgtfq/reprod_20260129114506_1435855/easyblocks/configuremake.py | |
| == 2026-01-29 11:45:06,495 easyblock.py:5328 INFO Dumped easyblock configuremake.py required for reproduction to /tmp/eb-uewjgtfq/reprod_20260129114506_1435855/easyblocks | |
| == 2026-01-29 11:45:06,495 easyblock.py:2498 INFO Number of iterations to perform for central part of installation procedure: 1 | |
| == 2026-01-29 11:45:06,495 build_log.py:329 INFO building and installing Compiler/GCCcore/14.3.0/XZ/5.8.1... | |
| == 2026-01-29 11:45:06,495 filetools.py:2144 INFO Lock /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/.locks/_p_project1_cswmanage_reuter1_EasyBuild_jedi_apps_software_XZ_5.8.1-GCCcore-14.3.0.lock does not exist | |
| == 2026-01-29 11:45:06,495 filetools.py:2101 INFO Creating lock at /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/.locks/_p_project1_cswmanage_reuter1_EasyBuild_jedi_apps_software_XZ_5.8.1-GCCcore-14.3.0.lock... | |
| == 2026-01-29 11:45:06,495 filetools.py:2061 INFO Creating directory /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/.locks/_p_project1_cswmanage_reuter1_EasyBuild_jedi_apps_software_XZ_5.8.1-GCCcore-14.3.0.lock (parents: True, set_gid: False, sticky: False) | |
| == 2026-01-29 11:45:06,495 filetools.py:2110 INFO Lock created: /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/.locks/_p_project1_cswmanage_reuter1_EasyBuild_jedi_apps_software_XZ_5.8.1-GCCcore-14.3.0.lock | |
| == 2026-01-29 11:45:06,497 run.py:504 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2026-01-29 11:45:06,498 run.py:518 INFO Running 'ulimit ...' shell command in /p/home/jusers/reuter1/jureca: | |
| ulimit -u | |
| == 2026-01-29 11:45:06,502 run.py:632 INFO 'ulimit ...' shell command completed successfully | |
| == 2026-01-29 11:45:06,502 run.py:634 INFO Output of 'ulimit ...' shell command (stdout + stderr): | |
| 488963 | |
| == 2026-01-29 11:45:06,502 systemtools.py:1414 INFO Limiting parallelism from 72 to 16 | |
| == 2026-01-29 11:45:06,502 easyblock.py:2534 INFO Setting parallelism: 16 | |
| == 2026-01-29 11:45:06,502 build_log.py:329 INFO fetching files and verifying checksums... | |
| == 2026-01-29 11:45:06,502 easyblock.py:4737 INFO Starting fetch step | |
| == 2026-01-29 11:45:06,502 easyconfig.py:1814 INFO Generating template values... | |
| == 2026-01-29 11:45:06,502 easyconfig.py:1833 INFO Template values: arch='aarch64', bitbucket_account='xz', builddir='/dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0', cuda_cc_cmake='90', cuda_cc_nvhpc='cc90', cuda_cc_semicolon_sep='9.0', cuda_cc_space_sep='9.0', cuda_cc_space_sep_no_period='90', cuda_compute_capabilities='9.0', cuda_int_comma_sep='90', cuda_int_semicolon_sep='90', cuda_int_space_sep='90', cuda_sm_comma_sep='sm_90', cuda_sm_space_sep='sm_90', github_account='xz', installdir='/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/XZ/5.8.1-GCCcore-14.3.0', module_name='XZ/5.8.1', name='XZ', nameletter='X', nameletterlower='x', namelower='xz', parallel='16', rpath_enabled='true', software_commit='', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='14.3.0', version='5.8.1', version_major='5', version_major_minor='5.8', version_major_minor_patch='5.8.1', version_minor='8', version_minor_patch='8.1', version_patch='1', versionprefix='', versionsuffix='' | |
| == 2026-01-29 11:45:06,502 easyblock.py:4748 INFO Running method fetch_step part of step fetch | |
| == 2026-01-29 11:45:06,502 easyblock.py:2635 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version | |
| == 2026-01-29 11:45:06,503 easyblock.py:920 INFO Considering directory in which easyconfig file is located when searching for xz-5.8.1.tar.bz2: /tmp/eb-uewjgtfq/files_pr25178/x/XZ | |
| == 2026-01-29 11:45:06,503 tools.py:275 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /p/project1/cswmanage/reuter1/EasyBuild/prog/bin/eb | |
| == 2026-01-29 11:45:06,503 tools.py:289 INFO Also considering installation prefix /p/project1/cswmanage/reuter1/EasyBuild/prog (determined via path to 'eb' script)... | |
| == 2026-01-29 11:45:06,503 easyblock.py:962 INFO Found file xz-5.8.1.tar.bz2 at /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/sources/x/XZ/xz-5.8.1.tar.bz2 | |
| == 2026-01-29 11:45:06,503 easyblock.py:580 INFO Added sources: [{'name': 'xz-5.8.1.tar.bz2', 'path': '/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/sources/x/XZ/xz-5.8.1.tar.bz2', 'cmd': None, 'checksum': '5965c692c4c8800cd4b33ce6d0f6ac9ac9d6ab227b17c512b6561bce4f08d47e', 'finalpath': '/dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0'}] | |
| == 2026-01-29 11:45:06,503 easyblock.py:920 INFO Considering directory in which easyconfig file is located when searching for XZ-5.8.1-RHEL9.patch: /tmp/eb-uewjgtfq/files_pr25178/x/XZ | |
| == 2026-01-29 11:45:06,503 tools.py:275 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /p/project1/cswmanage/reuter1/EasyBuild/prog/bin/eb | |
| == 2026-01-29 11:45:06,503 tools.py:289 INFO Also considering installation prefix /p/project1/cswmanage/reuter1/EasyBuild/prog (determined via path to 'eb' script)... | |
| == 2026-01-29 11:45:06,503 easyblock.py:962 INFO Found file XZ-5.8.1-RHEL9.patch at /tmp/eb-uewjgtfq/files_pr25178/x/XZ/XZ-5.8.1-RHEL9.patch | |
| == 2026-01-29 11:45:06,503 easyblock.py:626 INFO Added patches: [{'name': 'XZ-5.8.1-RHEL9.patch', 'postinstall': False, 'path': '/tmp/eb-uewjgtfq/files_pr25178/x/XZ/XZ-5.8.1-RHEL9.patch', 'checksum': '02b00e89b0c18c9f42d4aeaf8ec29767c2a96b0cca505c6f1c5d40c7d9cda765'}] | |
| == 2026-01-29 11:45:06,505 easyblock.py:2689 INFO sha256 checksum for /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/sources/x/XZ/xz-5.8.1.tar.bz2: 5965c692c4c8800cd4b33ce6d0f6ac9ac9d6ab227b17c512b6561bce4f08d47e | |
| == 2026-01-29 11:45:06,505 easyblock.py:2689 INFO sha256 checksum for /tmp/eb-uewjgtfq/files_pr25178/x/XZ/XZ-5.8.1-RHEL9.patch: 02b00e89b0c18c9f42d4aeaf8ec29767c2a96b0cca505c6f1c5d40c7d9cda765 | |
| == 2026-01-29 11:45:06,505 easyblock.py:2724 INFO Checking dirs that need to be created: ['/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/XZ/5.8.1-GCCcore-14.3.0', '/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all/Compiler/GCCcore/14.3.0/XZ'] | |
| == 2026-01-29 11:45:06,506 configuremake.py:96 INFO config.guess version: 2023-08-22 (last updated: 2026-01-05T16:21:28.559101, SHA256 checksum: ec2577614252326f889df1de97b9a457c03a9a94811048563c211a44496d8ba3) | |
| == 2026-01-29 11:45:06,506 configuremake.py:152 INFO Found config.guess at /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/sources/generic/eb_v5.2.1.dev0/ConfigureMake/config.guess | |
| == 2026-01-29 11:45:06,506 easyblock.py:4748 INFO Running method checksum_step part of step fetch | |
| == 2026-01-29 11:45:06,507 easyblock.py:2742 INFO Checksum verification for /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/sources/x/XZ/xz-5.8.1.tar.bz2 using 5965c692c4c8800cd4b33ce6d0f6ac9ac9d6ab227b17c512b6561bce4f08d47e passed. | |
| == 2026-01-29 11:45:06,507 easyblock.py:2742 INFO Checksum verification for /tmp/eb-uewjgtfq/files_pr25178/x/XZ/XZ-5.8.1-RHEL9.patch using 02b00e89b0c18c9f42d4aeaf8ec29767c2a96b0cca505c6f1c5d40c7d9cda765 passed. | |
| == 2026-01-29 11:45:06,507 build_log.py:329 INFO ... (took < 1 sec) | |
| == 2026-01-29 11:45:06,507 build_log.py:329 INFO creating build dir, resetting environment... | |
| == 2026-01-29 11:45:06,507 easyblock.py:4737 INFO Starting ready step | |
| == 2026-01-29 11:45:06,507 easyconfig.py:1814 INFO Generating template values... | |
| == 2026-01-29 11:45:06,507 easyconfig.py:1833 INFO Template values: arch='aarch64', bitbucket_account='xz', builddir='/dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0', cuda_cc_cmake='90', cuda_cc_nvhpc='cc90', cuda_cc_semicolon_sep='9.0', cuda_cc_space_sep='9.0', cuda_cc_space_sep_no_period='90', cuda_compute_capabilities='9.0', cuda_int_comma_sep='90', cuda_int_semicolon_sep='90', cuda_int_space_sep='90', cuda_sm_comma_sep='sm_90', cuda_sm_space_sep='sm_90', github_account='xz', installdir='/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/XZ/5.8.1-GCCcore-14.3.0', module_name='XZ/5.8.1', name='XZ', nameletter='X', nameletterlower='x', namelower='xz', parallel='16', rpath_enabled='true', software_commit='', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='14.3.0', version='5.8.1', version_major='5', version_major_minor='5.8', version_major_minor_patch='5.8.1', version_minor='8', version_minor_patch='8.1', version_patch='1', versionprefix='', versionsuffix='' | |
| == 2026-01-29 11:45:06,508 easyblock.py:4748 INFO Running method check_readiness_step part of step ready | |
| == 2026-01-29 11:45:06,508 run.py:518 INFO Running '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command in /p/home/jusers/reuter1/jureca: | |
| /p/software/jedi/lmod/8.7.64/libexec/lmod python --terse list | |
| == 2026-01-29 11:45:06,535 run.py:632 INFO '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command completed successfully | |
| == 2026-01-29 11:45:06,535 run.py:634 INFO Output of '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command (stdout only): | |
| import os | |
| os.environ["MODULEPATH"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all:/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all/Core"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "bnN0YWxsYXRpb25zOi9wL3NvZnR3YXJlL2RlZmF1bHQvZGV2ZWwiLAp9Cg=="; | |
| os.environ["_ModuleTable_Sz_"] = "2"; | |
| _mlstatus = True | |
| Warnings and errors of '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command (stderr only): | |
| No modules loaded | |
| == 2026-01-29 11:45:06,535 easyblock.py:4748 INFO Running method make_builddir part of step ready | |
| == 2026-01-29 11:45:06,535 easyblock.py:1266 INFO Found old directory /dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0 | |
| == 2026-01-29 11:45:06,539 filetools.py:423 INFO Path /dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0 successfully removed. | |
| == 2026-01-29 11:45:06,539 easyblock.py:1289 INFO Removed old directory /dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0 | |
| == 2026-01-29 11:45:06,539 filetools.py:2061 INFO Creating directory /dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0 (parents: True, set_gid: False, sticky: False) | |
| == 2026-01-29 11:45:06,539 easyblock.py:4748 INFO Running method reset_env part of step ready | |
| == 2026-01-29 11:45:06,539 easyblock.py:4748 INFO Running method handle_iterate_opts part of step ready | |
| == 2026-01-29 11:45:06,539 easyconfig.py:1814 INFO Generating template values... | |
| == 2026-01-29 11:45:06,539 easyconfig.py:1833 INFO Template values: arch='aarch64', bitbucket_account='xz', builddir='/dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0', cuda_cc_cmake='90', cuda_cc_nvhpc='cc90', cuda_cc_semicolon_sep='9.0', cuda_cc_space_sep='9.0', cuda_cc_space_sep_no_period='90', cuda_compute_capabilities='9.0', cuda_int_comma_sep='90', cuda_int_semicolon_sep='90', cuda_int_space_sep='90', cuda_sm_comma_sep='sm_90', cuda_sm_space_sep='sm_90', github_account='xz', installdir='/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/XZ/5.8.1-GCCcore-14.3.0', module_name='XZ/5.8.1', name='XZ', nameletter='X', nameletterlower='x', namelower='xz', parallel='16', rpath_enabled='true', software_commit='', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='14.3.0', version='5.8.1', version_major='5', version_major_minor='5.8', version_major_minor_patch='5.8.1', version_minor='8', version_minor_patch='8.1', version_patch='1', versionprefix='', versionsuffix='' | |
| == 2026-01-29 11:45:06,539 build_log.py:329 INFO ... (took < 1 sec) | |
| == 2026-01-29 11:45:06,539 build_log.py:329 INFO unpacking... | |
| == 2026-01-29 11:45:06,539 easyblock.py:4737 INFO Starting extract step | |
| == 2026-01-29 11:45:06,540 easyconfig.py:1814 INFO Generating template values... | |
| == 2026-01-29 11:45:06,540 easyconfig.py:1833 INFO Template values: arch='aarch64', bitbucket_account='xz', builddir='/dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0', cuda_cc_cmake='90', cuda_cc_nvhpc='cc90', cuda_cc_semicolon_sep='9.0', cuda_cc_space_sep='9.0', cuda_cc_space_sep_no_period='90', cuda_compute_capabilities='9.0', cuda_int_comma_sep='90', cuda_int_semicolon_sep='90', cuda_int_space_sep='90', cuda_sm_comma_sep='sm_90', cuda_sm_space_sep='sm_90', github_account='xz', installdir='/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/XZ/5.8.1-GCCcore-14.3.0', module_name='XZ/5.8.1', name='XZ', nameletter='X', nameletterlower='x', namelower='xz', parallel='16', rpath_enabled='true', software_commit='', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='14.3.0', version='5.8.1', version_major='5', version_major_minor='5.8', version_major_minor_patch='5.8.1', version_minor='8', version_minor_patch='8.1', version_patch='1', versionprefix='', versionsuffix='' | |
| == 2026-01-29 11:45:06,540 easyblock.py:4748 INFO Running method extract_step part of step extract | |
| == 2026-01-29 11:45:06,540 easyblock.py:2874 INFO Unpacking source xz-5.8.1.tar.bz2 | |
| == 2026-01-29 11:45:06,544 run.py:478 INFO run_shell_cmd: Script to start debug shell for 'tar ...' shell command | |
| will be saved to /tmp/eb-uewjgtfq/run-shell-cmd-output/tar-l_pvkkwk/cmd.sh | |
| output will be logged to /tmp/eb-uewjgtfq/run-shell-cmd-output/tar-l_pvkkwk/out.txt | |
| == 2026-01-29 11:45:06,545 run.py:504 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2026-01-29 11:45:06,545 run.py:518 INFO Running 'tar ...' shell command in /dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0: | |
| tar xjf /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/sources/x/XZ/xz-5.8.1.tar.bz2 | |
| == 2026-01-29 11:45:06,824 run.py:632 INFO 'tar ...' shell command completed successfully | |
| == 2026-01-29 11:45:06,824 run.py:634 INFO Output of 'tar ...' shell command (stdout + stderr): | |
| == 2026-01-29 11:45:06,824 build_log.py:329 INFO ... (took < 1 sec) | |
| == 2026-01-29 11:45:06,824 build_log.py:329 INFO patching... | |
| == 2026-01-29 11:45:06,824 easyblock.py:4737 INFO Starting patch step | |
| == 2026-01-29 11:45:06,824 easyconfig.py:1814 INFO Generating template values... | |
| == 2026-01-29 11:45:06,825 easyconfig.py:1833 INFO Template values: arch='aarch64', bitbucket_account='xz', builddir='/dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0', cuda_cc_cmake='90', cuda_cc_nvhpc='cc90', cuda_cc_semicolon_sep='9.0', cuda_cc_space_sep='9.0', cuda_cc_space_sep_no_period='90', cuda_compute_capabilities='9.0', cuda_int_comma_sep='90', cuda_int_semicolon_sep='90', cuda_int_space_sep='90', cuda_sm_comma_sep='sm_90', cuda_sm_space_sep='sm_90', github_account='xz', installdir='/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/XZ/5.8.1-GCCcore-14.3.0', module_name='XZ/5.8.1', name='XZ', nameletter='X', nameletterlower='x', namelower='xz', parallel='16', rpath_enabled='true', software_commit='', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='14.3.0', version='5.8.1', version_major='5', version_major_minor='5.8', version_major_minor_patch='5.8.1', version_minor='8', version_minor_patch='8.1', version_patch='1', versionprefix='', versionsuffix='' | |
| == 2026-01-29 11:45:06,825 easyblock.py:4748 INFO Running method patch_step part of step patch | |
| == 2026-01-29 11:45:06,825 easyblock.py:2892 INFO Applying patch XZ-5.8.1-RHEL9.patch | |
| == 2026-01-29 11:45:06,830 run.py:478 INFO run_shell_cmd: Script to start debug shell for 'patch ...' shell command | |
| will be saved to /tmp/eb-uewjgtfq/run-shell-cmd-output/patch-omad33b0/cmd.sh | |
| output will be logged to /tmp/eb-uewjgtfq/run-shell-cmd-output/patch-omad33b0/out.txt | |
| == 2026-01-29 11:45:06,830 run.py:504 INFO Path to bash that will be used to run shell commands: /usr/bin/bash | |
| == 2026-01-29 11:45:06,830 run.py:518 INFO Running 'patch ...' shell command in /dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0/xz-5.8.1: | |
| patch -p1 -i /tmp/eb-uewjgtfq/files_pr25178/x/XZ/XZ-5.8.1-RHEL9.patch | |
| == 2026-01-29 11:45:06,835 run.py:632 INFO 'patch ...' shell command completed successfully | |
| == 2026-01-29 11:45:06,835 run.py:634 INFO Output of 'patch ...' shell command (stdout + stderr): | |
| patching file src/common/my_landlock.h | |
| patching file src/common/my_landlock.h | |
| patching file src/common/my_landlock.h | |
| == 2026-01-29 11:45:06,835 build_log.py:329 INFO ... (took < 1 sec) | |
| == 2026-01-29 11:45:06,835 build_log.py:329 INFO preparing... | |
| == 2026-01-29 11:45:06,835 easyblock.py:4737 INFO Starting prepare step | |
| == 2026-01-29 11:45:06,835 easyconfig.py:1814 INFO Generating template values... | |
| == 2026-01-29 11:45:06,835 easyconfig.py:1833 INFO Template values: arch='aarch64', bitbucket_account='xz', builddir='/dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0', cuda_cc_cmake='90', cuda_cc_nvhpc='cc90', cuda_cc_semicolon_sep='9.0', cuda_cc_space_sep='9.0', cuda_cc_space_sep_no_period='90', cuda_compute_capabilities='9.0', cuda_int_comma_sep='90', cuda_int_semicolon_sep='90', cuda_int_space_sep='90', cuda_sm_comma_sep='sm_90', cuda_sm_space_sep='sm_90', github_account='xz', installdir='/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/XZ/5.8.1-GCCcore-14.3.0', module_name='XZ/5.8.1', name='XZ', nameletter='X', nameletterlower='x', namelower='xz', parallel='16', rpath_enabled='true', software_commit='', start_dir='None', sysroot='', toolchain_name='GCCcore', toolchain_version='14.3.0', version='5.8.1', version_major='5', version_major_minor='5.8', version_major_minor_patch='5.8.1', version_minor='8', version_minor_patch='8.1', version_patch='1', versionprefix='', versionsuffix='' | |
| == 2026-01-29 11:45:06,835 easyblock.py:4748 INFO Running method prepare_step part of step prepare | |
| == 2026-01-29 11:45:06,836 modules.py:1054 INFO Checking whether Core/gettext/0.25 exists... | |
| == 2026-01-29 11:45:06,836 modules.py:1059 INFO Module Core/gettext/0.25 exists (found in list of available modules) | |
| == 2026-01-29 11:45:06,836 modules.py:1082 INFO Result for existence check of Core/gettext/0.25 module: True | |
| == 2026-01-29 11:45:06,836 modules.py:1054 INFO Checking whether Compiler/GCCcore/14.3.0/binutils/2.44 exists... | |
| == 2026-01-29 11:45:06,836 modules.py:1059 INFO Module Compiler/GCCcore/14.3.0/binutils/2.44 exists (found in list of available modules) | |
| == 2026-01-29 11:45:06,836 modules.py:1082 INFO Result for existence check of Compiler/GCCcore/14.3.0/binutils/2.44 module: True | |
| == 2026-01-29 11:45:06,836 modules.py:1054 INFO Checking whether Core/GCCcore/14.3.0 exists... | |
| == 2026-01-29 11:45:06,836 modules.py:1061 INFO Module Core/GCCcore/14.3.0 not found in list of available modules, checking via 'module show'... | |
| == 2026-01-29 11:45:06,836 run.py:518 INFO Running '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command in /dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0/xz-5.8.1: | |
| /p/software/jedi/lmod/8.7.64/libexec/lmod python show Core/GCCcore/14.3.0 | |
| == 2026-01-29 11:45:07,060 run.py:632 INFO '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command completed successfully | |
| == 2026-01-29 11:45:07,060 run.py:634 INFO Output of '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command (stdout only): | |
| import os | |
| os.environ["MODULEPATH"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all:/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all/Core"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "bnN0YWxsYXRpb25zOi9wL3NvZnR3YXJlL2RlZmF1bHQvZGV2ZWwiLAp9Cg=="; | |
| os.environ["_ModuleTable_Sz_"] = "2"; | |
| _mlstatus = True | |
| Warnings and errors of '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command (stderr only): | |
| -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all/Core/GCCcore/14.3.0.lua: | |
| -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |
| help([[ | |
| Description | |
| =========== | |
| The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, | |
| as well as libraries for these languages (libstdc++, libgcj,...). | |
| More information | |
| ================ | |
| - Homepage: https://gcc.gnu.org/ | |
| ]]) | |
| whatis("Description: The GNU Compiler Collection includes front ends for C, C++, Objective-C, Fortran, Java, and Ada, | |
| as well as libraries for these languages (libstdc++, libgcj,...).") | |
| whatis("Homepage: https://gcc.gnu.org/") | |
| whatis("URL: https://gcc.gnu.org/") | |
| conflict("GCCcore") | |
| prepend_path("MODULEPATH","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all/Compiler/GCCcore/14.3.0") | |
| prepend_path("CMAKE_LIBRARY_PATH","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/lib64") | |
| prepend_path("CMAKE_PREFIX_PATH","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0") | |
| prepend_path("LD_LIBRARY_PATH","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/lib64") | |
| prepend_path("LIBRARY_PATH","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/lib") | |
| prepend_path("LIBRARY_PATH","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/lib64") | |
| prepend_path("MANPATH","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/share/man") | |
| prepend_path("PATH","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/bin") | |
| prepend_path("XDG_DATA_DIRS","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/share") | |
| setenv("EBROOTGCCCORE","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0") | |
| setenv("EBVERSIONGCCCORE","14.3.0") | |
| setenv("EBDEVELGCCCORE","/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/easybuild/Core-GCCcore-14.3.0-easybuild-devel") | |
| == 2026-01-29 11:45:07,060 modules.py:1082 INFO Result for existence check of Core/GCCcore/14.3.0 module: True | |
| == 2026-01-29 11:45:07,060 run.py:518 INFO Running '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command in /dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0/xz-5.8.1: | |
| /p/software/jedi/lmod/8.7.64/libexec/lmod python load GCCcore/14.3.0 | |
| == 2026-01-29 11:45:07,347 run.py:632 INFO '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command completed successfully | |
| == 2026-01-29 11:45:07,347 run.py:634 INFO Output of '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command (stdout only): | |
| import os | |
| os.environ["CMAKE_LIBRARY_PATH"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/lib64"; | |
| os.environ["CMAKE_PREFIX_PATH"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0"; | |
| os.environ["EBDEVELGCCCORE"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/easybuild/Core-GCCcore-14.3.0-easybuild-devel"; | |
| os.environ["EBROOTGCCCORE"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0"; | |
| os.environ["EBVERSIONGCCCORE"] = "14.3.0"; | |
| os.environ["LD_LIBRARY_PATH"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/lib64"; | |
| os.environ["LIBRARY_PATH"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/lib64:/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/lib"; | |
| os.environ["LOADEDMODULES"] = "GCCcore/14.3.0"; | |
| os.environ["MANPATH"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/share/man:/p/software/default/lmod/lmod/share/man::/opt/parastation/share/man:/opt/parastation/share/man"; | |
| os.environ["__LMOD_REF_COUNT_MODULEPATH"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all/Compiler/GCCcore/14.3.0:1;/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all/Core:1;/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all:1"; | |
| os.environ["MODULEPATH"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all/Compiler/GCCcore/14.3.0:/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all/Core:/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all"; | |
| os.environ["PATH"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/bin:/p/project1/cswmanage/reuter1/EasyBuild/prog/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/opt/jsc/bin:/usr/local/jsc/bin:/opt/parastation/bin:/p/software/default/bin:/opt/jsc/bin:/usr/local/jsc/bin:/opt/parastation/bin:/p/software/default/bin:/opt/parastation/bin"; | |
| os.environ["XDG_DATA_DIRS"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/GCCcore/14.3.0/share:/usr/local/share:/usr/share"; | |
| os.environ["_LMFILES_"] = "/p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/modules/all/Core/GCCcore/14.3.0.lua"; | |
| os.environ["_ModuleTable001_"] = "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"; | |
| os.environ["_ModuleTable002_"] = "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"; | |
| os.environ["_ModuleTable003_"] = "ICIvcC9zb2Z0d2FyZS9kZWZhdWx0L3N1cGVyY29tcHV0ZXJfbW9kdWxlczovcC9zb2Z0d2FyZS9kZWZhdWx0L3Byb2R1Y3Rpb25zdGFnZXM6L3Avc29mdHdhcmUvZGVmYXVsdC91c2VyaW5zdGFsbGF0aW9uczovcC9zb2Z0d2FyZS9kZWZhdWx0L2RldmVsIiwKfQo="; | |
| os.environ["_ModuleTable_Sz_"] = "3"; | |
| _mlstatus = True | |
| Warnings and errors of '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command (stderr only): | |
| == 2026-01-29 11:45:07,348 run.py:518 INFO Running '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command in /dev/shm/reuter1/easybuild/build/XZ/5.8.1/GCCcore-14.3.0/xz-5.8.1: | |
| /p/software/jedi/lmod/8.7.64/libexec/lmod python load gettext/0.25 | |
| == 2026-01-29 11:45:08,782 run.py:636 WARNING '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command FAILED (exit code 1) | |
| == 2026-01-29 11:45:08,783 run.py:637 INFO Output of '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command (stdout only): | |
| _mlstatus = False | |
| Warnings and errors of '/p/software/jedi/lmod/8.7.64/libexec/lmod ...' command (stderr only): | |
| Lmod has detected the following error: The following module(s) are unknown: "XZ/5.8.1" | |
| Please check the spelling or version number. Also try "module spider ..." | |
| It is also possible your cache file is out-of-date; it may help to try: | |
| $ module --ignore_cache load "XZ/5.8.1" | |
| Also make sure that all modulefiles written in TCL start with the string #%Module | |
| == 2026-01-29 11:45:08,830 build_log.py:233 ERROR EasyBuild encountered an error: Module command '/p/software/jedi/lmod/8.7.64/libexec/lmod python load gettext/0.25' failed with exit code 1; stderr: Lmod has detected the following error: The following module(s) are unknown: "XZ/5.8.1" | |
| Please check the spelling or version number. Also try "module spider ..." | |
| It is also possible your cache file is out-of-date; it may help to try: | |
| $ module --ignore_cache load "XZ/5.8.1" | |
| Also make sure that all modulefiles written in TCL start with the string #%Module | |
| ; stdout: _mlstatus = False | |
| (at easybuild/tools/modules.py:1276 in run_module) | |
| Callstack: | |
| easybuild/tools/modules.py:1276 in run_module | |
| easybuild/tools/modules.py:1131 in load | |
| easybuild/tools/toolchain/toolchain.py:706 in _load_dependencies_modules | |
| easybuild/tools/toolchain/toolchain.py:757 in _load_modules | |
| easybuild/tools/toolchain/toolchain.py:904 in prepare | |
| easybuild/framework/easyblock.py:3002 in prepare_step | |
| easybuild/framework/easyblock.py:4764 in run_step | |
| easybuild/framework/easyblock.py:4923 in run_all_steps | |
| easybuild/framework/easyblock.py:5111 in build_and_install_one | |
| easybuild/main.py:178 in build_and_install_software | |
| easybuild/main.py:611 in process_eb_args | |
| easybuild/main.py:795 in main | |
| easybuild/main.py:844 in main_with_hooks | |
| easybuild/main.py:859 in <module> | |
| == 2026-01-29 11:45:08,830 build_log.py:329 INFO ... (took 1 secs) | |
| == 2026-01-29 11:45:08,831 filetools.py:2152 INFO Removing lock /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/.locks/_p_project1_cswmanage_reuter1_EasyBuild_jedi_apps_software_XZ_5.8.1-GCCcore-14.3.0.lock... | |
| == 2026-01-29 11:45:08,831 filetools.py:423 INFO Path /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/.locks/_p_project1_cswmanage_reuter1_EasyBuild_jedi_apps_software_XZ_5.8.1-GCCcore-14.3.0.lock successfully removed. | |
| == 2026-01-29 11:45:08,831 filetools.py:2156 INFO Lock removed: /p/project1/cswmanage/reuter1/EasyBuild/jedi/apps/software/.locks/_p_project1_cswmanage_reuter1_EasyBuild_jedi_apps_software_XZ_5.8.1-GCCcore-14.3.0.lock | |
| == 2026-01-29 11:45:08,831 easyblock.py:390 INFO Closing log for application name XZ version 5.8.1 |
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