Alexandre Drouin aldro61

I hereby claim:

I am aldro61 on github.
I am aldro61 (https://keybase.io/aldro61) on keybase.
I have a public key whose fingerprint is 70AC 5392 B66E 4935 58E6 B243 F5E3 1272 81E8 C206

To claim this, I am signing this object:

	# Generate a logspace from numpy in bash
	# Usage: logspace start end [count, default=10]
	# Just source this file or add it to your .bashrc
	logspace () {
	start=$1
	end=$2
	if [ $# -ne 3 ]
	then
	count=10
	else

	"""
	Load the MNIST dataset into numpy arrays

	Author: Alexandre Drouin
	License: BSD

	"""
	import numpy as np

	from tensorflow.examples.tutorials.mnist import input_data

	def load_hic_matrix(hic_path):
	f = open(hic_path, "r")

	# Parse the header
	header = f.next()
	assert header[0] == "#"
	min_row, max_row, min_col, max_col = [int(x) for x in header[2:].split(" ")]

	# Create an empty matrix of n_fragments x n_fragments
	hic = np.zeros((max_col + 1, max_col + 1))

	"""
	Compile with gcc flag -mpopcnt
	"""
	import numpy as np
	cimport numpy as np
	cimport cython
	from libc.stdint cimport uint32_t, uint8_t

	cdef extern int __builtin_popcount(unsigned int) nogil

	# Copyright (c) 2013 Alexandre Drouin. All rights reserved.
	#
	# Permission is hereby granted, free of charge, to any person obtaining a copy of
	# this software and associated documentation files (the "Software"), to deal in
	# the Software without restriction, including without limitation the rights to
	# use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies
	# of the Software, and to permit persons to whom the Software is furnished to do
	# so, subject to the following conditions:
	#
	# The above copyright notice and this permission notice shall be included in all