Caner Ercan caner-ercan
caner-ercan
/ Alignment - MultiFile Distribute to all other images.groovy
Last active
February 16, 2024 17:04
— forked from Svidro/!Manipulating objects in QuPath
Manipulating objects in #QuPath
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| /** | |
| From https://forum.image.sc/t/qupath-multiple-image-alignment-and-object-transfer/35521/2 | |
| 0.2.0m9 | |
| If you have annotations within annotations, you may get duplicates. Ask on the forum or change the def pathObjects line. | |
| To use, have all objects desired in one image, and alignment files in the Affine folder within your project folder. | |
| If you have not saved those, this script will not work. | |
| It will use ALL of the affine transforms in that folder to transform the objects in the current image to the destination images | |
| that are named after the affine files. |
caner-ercan
/ QuPath Memory Monitor.groovy
Last active
February 16, 2024 16:52
— forked from petebankhead/QuPath Memory Monitor.groovy
Groovy script to help monitor memory use over time #QuPath
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| /** | |
| * A basic GUI to help monitor memory usage in QuPath. | |
| * | |
| * This helps both to find & address out-of-memory troubles by | |
| * 1. Showing how much memory is in use over time | |
| * 2. Giving a button to clear the tile cache - which can be | |
| * using up precious memory | |
| * 3. Giving quick access to control the number of threads used | |
| * for parallel processing | |
| * |