Kate Fieseler kate-fie

DPhil student in Computational Chemistry at the University of Oxford

bobbypaton / pymol_style.py

Last active November 16, 2025 17:23

Create high quality ball-and-stick molecular images with Pymol and other things like ESP surfaces and spin density plots

	# BallnStick creates a ball and stick representation of an object
	# Add_VDW creates a copy of an object with full-sized, transparent spheres
	# Bondi VDW values added below to override default Pymol settings
	from pymol import cmd
	from pymol import stored
	# Bondi VDW values
	cmd.alter("elem Ac", "vdw=2.00")
	cmd.alter("elem Al", "vdw=2.00")
	cmd.alter("elem Am", "vdw=2.00")
	cmd.alter("elem Sb", "vdw=2.00")