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ktym/togodx-preset_2023-12-14T01_29_35.774Z.json

Created December 14, 2023 01:30
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togodx-preset_2023-12-14T01_29_35.774Z.json
[
{
"condition": {
"dataset": "ensembl_gene",
"filters": [
{
"attribute": "disease_diseases_mondo",
"nodes": [
"c__0005180"
]
},
{
"attribute": "variant_clinical_significance_togovar",
"nodes": [
"pathogenic_or_likely_pathogenic"
]
}
],
"annotations": [
{
"attribute": "protein_biological_process_uniprot",
"node": "GO_0008150"
},
{
"attribute": "protein_biological_process_uniprot",
"node": "GO_0008150"
}
],
"queries": []
},
"attributeSet": [
"gene_biotype_ensembl",
"gene_chromosome_ensembl",
"gene_number_of_paralogs_homologene",
"gene_ortholog_existence_homologene",
"gene_evolutionary_conservation_homologene",
"gene_biological_process_ncbigene",
"gene_cellular_component_ncbigene",
"gene_molecular_function_ncbigene",
"gene_high_level_expression_refex",
"gene_low_level_expression_refex",
"gene_high_level_expression_gtex6",
"gene_not_expressed_in_tissues_gtex",
"gene_specific_expression_in_tissues_hpa",
"gene_specific_expression_in_cells_hpa",
"transcript_biotype_ensembl",
"transcript_length_ensembl",
"protein_uniprotkb_section_uniprot",
"protein_domains_uniprot",
"protein_biological_process_uniprot",
"protein_cellular_component_uniprot",
"protein_molecular_function_uniprot",
"protein_isoform_specific_go_existence_nextprot",
"protein_ligands_uniprot",
"protein_molecular_mass_uniprot",
"protein_ptms_uniprot",
"protein_catalytic_activity_uniprot",
"protein_number_of_transmembrane_domains_uniprot",
"protein_number_of_phosphorylation_sites_uniprot",
"protein_number_of_glycosylation_sites_uniprot",
"protein_disease_related_proteins_uniprot",
"protein_isolation_source_uniprot",
"protein_evidence_of_existence_nextprot",
"protein_isoform_specific_interaction_existence_nextprot",
"protein_pathway_annotation_uniprot",
"structure_data_existence_uniprot",
"structure_helical_regions_uniprot",
"structure_beta_strand_regions_uniprot",
"structure_number_of_turns_uniprot",
"structure_number_of_disulfide_bonds_uniprot",
"structure_disorder_annotation_uniprot",
"structure_number_of_peptides_pdb",
"structure_analysis_methods_pdb",
"interaction_proteins_in_pathway_reactome",
"interaction_compounds_in_pathway_reactome",
"interaction_number_of_interacting_proteins_uniprot",
"interaction_chembl_assay_existence_uniprot",
"compound_chemical_role_chebi",
"compound_application_type_chebi",
"compound_action_type_chembl",
"compound_biological_role_chebi",
"compound_drug_indication_mesh_chembl",
"compound_drug_development_phase_chembl",
"compound_atc_classification_pubchem",
"compound_atc_classification_chembl",
"glycan_mass_glycosmos",
"glycan_tissue_glycosmos",
"glycan_subsumption_glycosmos",
"disease_diseases_mondo",
"disease_diseases_mesh",
"disease_diseases_nando",
"disease_related_dbs_mondo",
"disease_phenotypic_abnormality_hpo",
"disease_inheritance_hpo",
"variant_gwas_togovar",
"variant_clinical_significance_togovar"
]
},
{
"condition": {
"dataset": "ensembl_gene",
"filters": [
{
"attribute": "disease_diseases_mondo",
"nodes": [
"c__0005180"
]
},
{
"attribute": "variant_clinical_significance_togovar",
"nodes": [
"pathogenic_or_likely_pathogenic"
]
}
],
"annotations": [
{
"attribute": "protein_biological_process_uniprot"
}
],
"queries": []
},
"attributeSet": [
"gene_biotype_ensembl",
"gene_chromosome_ensembl",
"gene_number_of_paralogs_homologene",
"gene_ortholog_existence_homologene",
"gene_evolutionary_conservation_homologene",
"gene_biological_process_ncbigene",
"gene_cellular_component_ncbigene",
"gene_molecular_function_ncbigene",
"gene_high_level_expression_refex",
"gene_low_level_expression_refex",
"gene_high_level_expression_gtex6",
"gene_not_expressed_in_tissues_gtex",
"gene_specific_expression_in_tissues_hpa",
"gene_specific_expression_in_cells_hpa",
"transcript_biotype_ensembl",
"transcript_length_ensembl",
"protein_uniprotkb_section_uniprot",
"protein_domains_uniprot",
"protein_biological_process_uniprot",
"protein_cellular_component_uniprot",
"protein_molecular_function_uniprot",
"protein_isoform_specific_go_existence_nextprot",
"protein_ligands_uniprot",
"protein_molecular_mass_uniprot",
"protein_ptms_uniprot",
"protein_catalytic_activity_uniprot",
"protein_number_of_transmembrane_domains_uniprot",
"protein_number_of_phosphorylation_sites_uniprot",
"protein_number_of_glycosylation_sites_uniprot",
"protein_disease_related_proteins_uniprot",
"protein_isolation_source_uniprot",
"protein_evidence_of_existence_nextprot",
"protein_isoform_specific_interaction_existence_nextprot",
"protein_pathway_annotation_uniprot",
"structure_data_existence_uniprot",
"structure_helical_regions_uniprot",
"structure_beta_strand_regions_uniprot",
"structure_number_of_turns_uniprot",
"structure_number_of_disulfide_bonds_uniprot",
"structure_disorder_annotation_uniprot",
"structure_number_of_peptides_pdb",
"structure_analysis_methods_pdb",
"interaction_proteins_in_pathway_reactome",
"interaction_compounds_in_pathway_reactome",
"interaction_number_of_interacting_proteins_uniprot",
"interaction_chembl_assay_existence_uniprot",
"compound_chemical_role_chebi",
"compound_application_type_chebi",
"compound_action_type_chembl",
"compound_biological_role_chebi",
"compound_drug_indication_mesh_chembl",
"compound_drug_development_phase_chembl",
"compound_atc_classification_pubchem",
"compound_atc_classification_chembl",
"glycan_mass_glycosmos",
"glycan_tissue_glycosmos",
"glycan_subsumption_glycosmos",
"disease_diseases_mondo",
"disease_diseases_mesh",
"disease_diseases_nando",
"disease_related_dbs_mondo",
"disease_phenotypic_abnormality_hpo",
"disease_inheritance_hpo",
"variant_gwas_togovar",
"variant_clinical_significance_togovar"
]
},
{
"condition": {
"dataset": "ensembl_gene",
"filters": [
{
"attribute": "disease_diseases_mondo",
"nodes": [
"c__0005180"
]
},
{
"attribute": "variant_clinical_significance_togovar",
"nodes": [
"pathogenic_or_likely_pathogenic"
]
}
],
"annotations": [
{
"attribute": "protein_biological_process_uniprot"
},
{
"attribute": "interaction_proteins_in_pathway_reactome"
}
],
"queries": []
},
"attributeSet": [
"gene_biotype_ensembl",
"gene_chromosome_ensembl",
"gene_number_of_paralogs_homologene",
"gene_ortholog_existence_homologene",
"gene_evolutionary_conservation_homologene",
"gene_biological_process_ncbigene",
"gene_cellular_component_ncbigene",
"gene_molecular_function_ncbigene",
"gene_high_level_expression_refex",
"gene_low_level_expression_refex",
"gene_high_level_expression_gtex6",
"gene_not_expressed_in_tissues_gtex",
"gene_specific_expression_in_tissues_hpa",
"gene_specific_expression_in_cells_hpa",
"transcript_biotype_ensembl",
"transcript_length_ensembl",
"protein_uniprotkb_section_uniprot",
"protein_domains_uniprot",
"protein_biological_process_uniprot",
"protein_cellular_component_uniprot",
"protein_molecular_function_uniprot",
"protein_isoform_specific_go_existence_nextprot",
"protein_ligands_uniprot",
"protein_molecular_mass_uniprot",
"protein_ptms_uniprot",
"protein_catalytic_activity_uniprot",
"protein_number_of_transmembrane_domains_uniprot",
"protein_number_of_phosphorylation_sites_uniprot",
"protein_number_of_glycosylation_sites_uniprot",
"protein_disease_related_proteins_uniprot",
"protein_isolation_source_uniprot",
"protein_evidence_of_existence_nextprot",
"protein_isoform_specific_interaction_existence_nextprot",
"protein_pathway_annotation_uniprot",
"structure_data_existence_uniprot",
"structure_helical_regions_uniprot",
"structure_beta_strand_regions_uniprot",
"structure_number_of_turns_uniprot",
"structure_number_of_disulfide_bonds_uniprot",
"structure_disorder_annotation_uniprot",
"structure_number_of_peptides_pdb",
"structure_analysis_methods_pdb",
"interaction_proteins_in_pathway_reactome",
"interaction_compounds_in_pathway_reactome",
"interaction_number_of_interacting_proteins_uniprot",
"interaction_chembl_assay_existence_uniprot",
"compound_chemical_role_chebi",
"compound_application_type_chebi",
"compound_action_type_chembl",
"compound_biological_role_chebi",
"compound_drug_indication_mesh_chembl",
"compound_drug_development_phase_chembl",
"compound_atc_classification_pubchem",
"compound_atc_classification_chembl",
"glycan_mass_glycosmos",
"glycan_tissue_glycosmos",
"glycan_subsumption_glycosmos",
"disease_diseases_mondo",
"disease_diseases_mesh",
"disease_diseases_nando",
"disease_related_dbs_mondo",
"disease_phenotypic_abnormality_hpo",
"disease_inheritance_hpo",
"variant_gwas_togovar",
"variant_clinical_significance_togovar"
]
},
{
"condition": {
"dataset": "ensembl_gene",
"filters": [
{
"attribute": "disease_diseases_mondo",
"nodes": [
"c__0003847"
]
},
{
"attribute": "variant_clinical_significance_togovar",
"nodes": [
"pathogenic_or_likely_pathogenic"
]
}
],
"annotations": [
{
"attribute": "protein_biological_process_uniprot"
},
{
"attribute": "interaction_proteins_in_pathway_reactome"
}
],
"queries": []
},
"attributeSet": [
"gene_biotype_ensembl",
"gene_chromosome_ensembl",
"gene_number_of_paralogs_homologene",
"gene_ortholog_existence_homologene",
"gene_evolutionary_conservation_homologene",
"gene_biological_process_ncbigene",
"gene_cellular_component_ncbigene",
"gene_molecular_function_ncbigene",
"gene_high_level_expression_refex",
"gene_low_level_expression_refex",
"gene_high_level_expression_gtex6",
"gene_not_expressed_in_tissues_gtex",
"gene_specific_expression_in_tissues_hpa",
"gene_specific_expression_in_cells_hpa",
"transcript_biotype_ensembl",
"transcript_length_ensembl",
"protein_uniprotkb_section_uniprot",
"protein_domains_uniprot",
"protein_biological_process_uniprot",
"protein_cellular_component_uniprot",
"protein_molecular_function_uniprot",
"protein_isoform_specific_go_existence_nextprot",
"protein_ligands_uniprot",
"protein_molecular_mass_uniprot",
"protein_ptms_uniprot",
"protein_catalytic_activity_uniprot",
"protein_number_of_transmembrane_domains_uniprot",
"protein_number_of_phosphorylation_sites_uniprot",
"protein_number_of_glycosylation_sites_uniprot",
"protein_disease_related_proteins_uniprot",
"protein_isolation_source_uniprot",
"protein_evidence_of_existence_nextprot",
"protein_isoform_specific_interaction_existence_nextprot",
"protein_pathway_annotation_uniprot",
"structure_data_existence_uniprot",
"structure_helical_regions_uniprot",
"structure_beta_strand_regions_uniprot",
"structure_number_of_turns_uniprot",
"structure_number_of_disulfide_bonds_uniprot",
"structure_disorder_annotation_uniprot",
"structure_number_of_peptides_pdb",
"structure_analysis_methods_pdb",
"interaction_proteins_in_pathway_reactome",
"interaction_compounds_in_pathway_reactome",
"interaction_number_of_interacting_proteins_uniprot",
"interaction_chembl_assay_existence_uniprot",
"compound_chemical_role_chebi",
"compound_application_type_chebi",
"compound_action_type_chembl",
"compound_biological_role_chebi",
"compound_drug_indication_mesh_chembl",
"compound_drug_development_phase_chembl",
"compound_atc_classification_pubchem",
"compound_atc_classification_chembl",
"glycan_mass_glycosmos",
"glycan_tissue_glycosmos",
"glycan_subsumption_glycosmos",
"disease_diseases_mondo",
"disease_diseases_mesh",
"disease_diseases_nando",
"disease_related_dbs_mondo",
"disease_phenotypic_abnormality_hpo",
"disease_inheritance_hpo",
"variant_gwas_togovar",
"variant_clinical_significance_togovar"
]
}
]
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