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| { | |
| "@context": { | |
| "rdfs": "http://www.w3.org/2000/01/rdf-schema#", | |
| "ccle": "http://med2rdf.org/ontology/ccle#", | |
| "cclec": "https://portals.broadinstitute.org/ccle/page?cell_line=", | |
| "ccleg": "https://portals.broadinstitute.org/ccle/page?gene=", | |
| "faldo": "http://biohackathon.org/resource/faldo#", | |
| "hco": "http://identifiers.org/hco/", | |
| "m2r": "http://med2rdf.org/ontology#", | |
| "obo": "http://purl.obolibrary.org/obo/", | |
| "sio": "http://semanticscience.org/resource/", | |
| "transcript": "http://rdf.ebi.ac.uk/resource/ensembl.transcript/", | |
| "CCLE": "@id", | |
| "ccle_label": { | |
| "@id": "rdfs:label" | |
| }, | |
| "assay_gene": { | |
| "@id": "m2r:gene", | |
| "@type": "@id" | |
| }, | |
| "assay_sample": { | |
| "@id": "m2r:sample", | |
| "@type": "@id" | |
| }, | |
| "exp_val": { | |
| "@id": "sio:SIO_000300" | |
| }, | |
| "hist_primary": { | |
| "@id": "m2r:hist_primary" | |
| }, | |
| "hist_secondary": { | |
| "@id": "m2r:hist_secondary" | |
| }, | |
| "site_primary": { | |
| "@id": "m2r:site_primary" | |
| }, | |
| "ccle_variation_label": { | |
| "@id": "rdfs:label" | |
| }, | |
| "ccle_snp_start_pos": { | |
| "@id": "faldo:position" | |
| }, | |
| "ccle_snp_start_reference": { | |
| "@id": "faldo:reference", | |
| "@type": "@id" | |
| }, | |
| "ccle_snp_end_pos": { | |
| "@id": "faldo:position" | |
| }, | |
| "ccle_snp_end_reference": { | |
| "@id": "faldo:reference", | |
| "@type": "@id" | |
| }, | |
| "ccle_alternative_allele": { | |
| "@id": "m2r:alternative_allele" | |
| }, | |
| "ccle_variant_gene": { | |
| "@id": "m2r:gene", | |
| "@type": "@id" | |
| }, | |
| "ccle_reference_allele": { | |
| "@id": "m2r:reference_allele" | |
| }, | |
| "ccle_variant_transcript_label": { | |
| "@id": "rdfs:label" | |
| }, | |
| "ccle_variant_transcript_gene": { | |
| "@id": "m2r:gene", | |
| "@type": "@id" | |
| }, | |
| "ccle_variant_transcript_see_also": { | |
| "@id": "rdfs:seeAlso", | |
| "@type": "@id" | |
| }, | |
| "ccle_variant_consequence": { | |
| "@id": "m2r:variant_consequence", | |
| "@type": "@id" | |
| }, | |
| "ccle_variant_type": { | |
| "@id": "m2r:variant_type" | |
| }, | |
| "ccle_codon_change": { | |
| "@id": "ccle:codon_change" | |
| }, | |
| "ccle_dna_change": { | |
| "@id": "ccle:dna_change" | |
| }, | |
| "ccle_protein_change": { | |
| "@id": "ccle:protein_change" | |
| }, | |
| "gender": { | |
| "@id": "obo:SIO_000223", | |
| "@type": "@id" | |
| }, | |
| "ccle_see_also": { | |
| "@id": "rdfs:seeAlso", | |
| "@type": "@id" | |
| }, | |
| "EnsemblGene": "@id", | |
| "ensg_label": { | |
| "@id": "rdfs:label" | |
| }, | |
| "ensg_see_also": { | |
| "@id": "rdfs:seeAlso", | |
| "@type": "@id" | |
| }, | |
| "EntrezGene": "@id", | |
| "entrez_gene_label": { | |
| "@id": "rdfs:label" | |
| }, | |
| "entrez_gene_id": { | |
| "@id": "ccle:entrez_id" | |
| }, | |
| "Variation": "@id", | |
| "variation_label": { | |
| "@id": "rdfs:label" | |
| }, | |
| "snp_start_pos": { | |
| "@id": "faldo:position" | |
| }, | |
| "snp_start_reference": { | |
| "@id": "faldo:reference", | |
| "@type": "@id" | |
| }, | |
| "snp_end_pos": { | |
| "@id": "faldo:position" | |
| }, | |
| "snp_end_reference": { | |
| "@id": "faldo:reference", | |
| "@type": "@id" | |
| }, | |
| "alternative_allele": { | |
| "@id": "m2r:alternative_allele" | |
| }, | |
| "variant_gene": { | |
| "@id": "m2r:gene", | |
| "@type": "@id" | |
| }, | |
| "reference_allele": { | |
| "@id": "m2r:reference_allele" | |
| }, | |
| "variant_transcript_label": { | |
| "@id": "rdfs:label" | |
| }, | |
| "variant_transcript_gene": { | |
| "@id": "m2r:gene", | |
| "@type": "@id" | |
| }, | |
| "variant_transcript_see_also": { | |
| "@id": "rdfs:seeAlso", | |
| "@type": "@id" | |
| }, | |
| "variant_consequence": { | |
| "@id": "m2r:variant_consequence", | |
| "@type": "@id" | |
| }, | |
| "variant_type": { | |
| "@id": "m2r:variant_type" | |
| }, | |
| "codon_change": { | |
| "@id": "ccle:codon_change" | |
| }, | |
| "dna_change": { | |
| "@id": "ccle:dna_change" | |
| }, | |
| "protein_change": { | |
| "@id": "ccle:protein_change" | |
| } | |
| } | |
| } |
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