marcusrussi’s gists

marcusrussi / harvard-cluster-nextflow-covidestim-install.sh

Last active May 27, 2021 22:15

Install Nextflow on Harvard cluster and do a test run

	cd ~

	# Get an interactive session. --mem is important otherwise
	# you will probably get "OOM-killed" later on
	srun --pty -p test --mem=4G --time=120 bash

	# Load Java and Conda
	module load jdk/1.8.0_172-fasrc01 # This MIGHT not be neccessary, but doesn't hurt..
	module load Anaconda3/2019.10

marcusrussi / nyc_age_distribution_estimates.csv

Created March 17, 2020 15:17

Sourced from pages 31-42 of New York City Population Projections by Age/Sex & Borough, 2010-2040 (https://www1.nyc.gov/assets/planning/download/pdf/data-maps/nyc-population/projections_report_2010_2040.pdf)

borough	age	2010	2015	2020	2025	2030	2035	2040
bronx	0-4	103144	106770	109972	111127	110880	110982	112571
bronx	5-9	98664	102008	105775	109843	111137	110893	110942
bronx	10-14	99159	92423	95703	100081	104065	105297	105010
bronx	15-19	115662	105751	98987	103114	107753	111879	113100
bronx	20-24	112897	124181	113827	107423	111941	116901	121256
bronx	25-29	105710	115853	127995	117887	111171	116011	121249
bronx	30-34	97824	99969	109797	122434	112812	106338	110963
bronx	35-39	91016	91397	93530	103582	115705	106610	100424
bronx	40-44	96073	86719	87217	89976	99685	111331	102576

marcusrussi / canano.ino

Created January 17, 2020 15:54 — forked from Tbruno25/canano.ino

	// this sketch was brutally hacked together by TJ Bruno --- https://medium.com/@tbruno25

	#include <mcp_can.h>
	#include <SPI.h>

	unsigned long int rxId;
	unsigned char len = 0;
	unsigned char rxBuf[8];

	bool displayOnce;

marcusrussi / trapps_routes.tsv

Last active December 3, 2019 04:49

A list of rock climbing routes in The Trapps, Gardiner, NY. Note: 999999 means unsorted within the most local area. Otherwise, the cliff is sorted L->R

Key	Stars	Grade	Name
0	★ ½	5.2	Cordelette Arete
1	★ ½	5.3	Short and Simple
2	★	5.9	Birthday Biscuit Boy
3	★ ★	5.7+	Keyhole
4	★ ★	5.7	Katzenjammer
5	★ ★	5.7	Brat, The
6	★ ★	5.7	Handy Andy
7	★ ½	5.3	Easy Keyhole
8	★ ★	5.5	Black Fly

marcusrussi / reproduce_trajectories.sh

Last active October 21, 2019 18:09

	N_JOBS=10 # number of jobs to run in parallel
	FOLDER='exp3' # where the results should be stored
	RESULT_FILE='results_top10.csv' # cols should be [run.id, seed, density, lk] (no header)

	parallel -j $N_JOBS --csv \
	mkdir $FOLDER/{1} '&&' \
	srun -p interactive -N1 -n1 --time=10 \
	TBABM -t1 \
	-n30000 \
	-p {1}.json \

marcusrussi / less_print.less

Created September 25, 2019 19:55

Print, with color, from Less

	(from document start)
	\|$ aha \| wkhtmltopdf -s letter - fname.pdf

	or

	\|$ aha \| wkhtmltopdf -s letter - - \| lp

marcusrussi / gist:4d5c0f9d129d2cd4cce40ec962cca0bf

Last active September 24, 2019 15:14

Generate a list of 64-bit integers, one per line

	#!/usr/bin/env/bash

	NUM_INTS=100
	NUM_BYTES=$((8*NUM_INTS))

	head -c $NUM_BYTES /dev/urandom \|
	od -t u8 -An -w8 \| # Request 8-bit unsigned integers, no radix, 8 bits per line
	sed 's/ //g' \| # Replace any spaces with nothing

marcusrussi / tweed_daily_highs.sh

Created September 18, 2019 19:50

	TOKEN='ATreGoqkKeGhBrqAHVbNNTychduhSkdg'
	TWEED='USW00014758'

	# Print header, then pull daily weather summary from Tweed's station
	echo 'date,daily_hi' &&
	curl -sGH "token:$TOKEN" \
	-d "stationid=GHCND:$TWEED" \
	-d 'datasetid=GHCND' \
	-d 'startdate=2019-09-10' \
	-d 'enddate=2020-01-15' \

marcusrussi / variable_frequencies.R

Last active August 29, 2019 15:25

	requireNamespace("tibble")
	requireNamespace("dplyr")
	requireNamespace("purrr")

	# Tallies up the quantity of every distinct value in every variable in
	# a tibble, returning output as a list indexed on varible name.
	#
	# tbl -> list of {varname: {value, n}}
	# tbl: an ungrouped tibble
	# list: each element is a 2-element list. The first element

marcusrussi / get_tr_pics.sh

Last active June 17, 2019 22:45

	#!/usr/bin/env bash

	DEFAULT_TR_URL="https://cascadeclimbers.com/forum/topic/100929-tr-baker-river-to-ross-lake-in-technicolor-mystery-ndespair-pioneer-swiss-spectre-challenger-7252017/"

	# url for a TR -> broken urls of photos in OP
	function original_photo_urls () {
	curl -s $1 \|
	# All of the broken photo urls appear to contain 'plab/data/5'
	# as a substring
	egrep 'plab/data/5' \|

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