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miyanari/32bit autothreshold.py

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Created September 3, 2013 17:02
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32bit autothreshold.py
imp = IJ.getImage()
midslice = int(imp.getStackSize() / 2)
imp.setSlice(midslice)
#IJ.setThreshold(-50, -0.62)
ip.setAutoThreshold(AutoThresholder.Method.Default, False)
IJ.setThreshold(ip.getMinThreshold(), ip.getMaxThreshold())
print ip.getMaxThreshold()
print ip.getMinThreshold()
#th = ip.getMaxThreshold()
IJ.run("Convert to Mask", "method=Default background=Light black")
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