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moritzschaefer/convert_seurat_to_h5ad.ipynb

Created July 8, 2025 22:58
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convert_seurat_to_h5ad.ipynb
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r_seuratdisk.yaml
name: r_seuratdisk_env
channels:
- conda-forge
- bioconda
- defaults
dependencies:
- r-base
- r-seuratdisk
- r-seurat
- r-irkernel # For Jupyter integration
- nb_conda_kernels
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moritzschaefer commented Sep 26, 2025

Fails with Seurat v5

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